@zhoujj2013
2016-03-06T09:34:32.000000Z
字数 350
阅读 419
20160306-anno pipeline for RNA-seq
todo
anno pipeline for RNA-seq
- build db for every species
- if the species information unknown, blast to nt or nr db;
- if the species information unknown, blast to uniprot or trembl is better;
- build a pipeline for generate annotation databases;
build a pipeline for DEGs analysis
- naive method;
- cuffdiff
- edger
- EBseq
I don't want to try many method, just these 2 or 4 method.
Only choose 2.