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@zhoujj2013 2017-06-21T03:40:46.000000Z 字数 485 阅读 445

20170621-prediction function lncRNA by histone

phdnote

Golden standard dataset

http://science.sciencemag.org/content/early/2016/12/14/science.aah7111

http://www.nature.com/nrg/journal/v18/n2/full/nrg.2016.168.html

http://www.nature.com/nbt/journal/v34/n12/full/nbt.3715.html

Model

  1. SVM (canonical method);
  2. Random forest tree (canonical method);
  3. Deep learning method;
  4. unsupervise method (???);

toolkit for annotating lncRNAs

  1. motif;
  2. factor, co-factor for histone modification;

Path

/mnt/dfc_data1/zhoujj/Project/44.DeepLncRNA/

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